{ "_id": "6ac267acd743750d376d8942", "Package": "covid19.analytics", "Type": "Package", "Title": "Load and Analyze Live Data from the COVID-19 Pandemic", "Version": "2.1.3", "Date": "2022-08-18", "Author": "Marcelo Ponce [aut, cre], Amit Sandhel [ctb]", "Maintainer": "Marcelo Ponce ", "Description": "Load and analyze updated time series worldwide data of\nreported cases for the Novel Coronavirus Disease (COVID-19)\nfrom different sources, including the Johns Hopkins University\nCenter for Systems Science and Engineering (JHU CSSE) data\nrepository , \"Our\nWorld in Data\" among several others.\nThe datasets reporting the COVID-19 cases are available in two\nmain modalities, as a time series sequences and aggregated data\nfor the last day with greater spatial resolution. Several\nanalysis, visualization and modelling functions are available\nin the package that will allow the user to compute and\nvisualize total number of cases, total number of changes and\ngrowth rate globally or for an specific geographical location,\nwhile at the same time generating models using these trends;\ngenerate interactive visualizations and generate\nSusceptible-Infected-Recovered (SIR) model for the disease\nspread.", "License": "GPL (>=2)", "URL": "https://mponce0.github.io/covid19.analytics/", "BugReports": "https://github.com/mponce0/covid19.analytics/issues", "RoxygenNote": "7.1.0", "VignetteBuilder": "knitr", "Config/pak/sysreqs": "cmake make libicu-dev libuv1-dev libxml2-dev\nlibssl-dev zlib1g-dev", "Repository": "https://epiverse-connect.r-universe.dev", "Date/Publication": "2022-08-18 07:49:22 UTC", "RemoteUrl": "https://github.com/mponce0/covid19.analytics", "RemoteRef": "HEAD", "RemoteSha": "ef3236c77073d103c1177053eee028560362bd31", "NeedsCompilation": "no", "Packaged": { "Date": "2026-10-04 14:41:09 UTC", "User": "root" }, "_user": "epiverse-connect", "_type": "src", "_file": "covid19.analytics_2.1.3.tar.gz", "_fileid": "https://r2.ropensci.org/1daa85b05ba5c39ec80c6c9dfaa7ed9fa7873ec5c21323d402934e629d8f6bc2", "_filesize": 100806475, "_sha256": "1daa85b05ba5c39ec80c6c9dfaa7ed9fa7873ec5c21323d402934e629d8f6bc2", "_expires": "2027-01-12T14:50:13.000Z", "_created": "2026-10-04T14:41:09.000Z", "_published": "2026-10-04T14:50:20.011Z", "_jobs": [ { "job": 111459716242, "time": 264, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "WARNING", "artifact": "11306496801" }, { "job": 111459716216, "time": 202, "config": "linux-release-x86_64", "r": "4.6.1", "check": "WARNING", "artifact": "11306635635" }, { "job": 111459716246, "time": 216, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "WARNING", "artifact": "11305989128" }, { "job": 111459716160, "time": 188, "config": "macos-release-arm64", "r": "4.6.1", "check": "WARNING", "artifact": "11306082623" }, { "job": 111458538647, "time": 384, "config": "source", "r": "4.6.1", "check": "ERROR", "artifact": "11306426359" }, { "job": 111459716165, "time": 160, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "11305579311" }, { "job": 111459716197, "time": 220, "config": "windows-devel-x86_64", "r": "4.7.0", "check": "WARNING", "artifact": "11306346788" }, { "job": 111459716175, "time": 151, "config": "windows-oldrel-x86_64", "r": "4.5.3", "check": "WARNING", "artifact": "11306471469" }, { "job": 111459716194, "time": 195, "config": "windows-release-x86_64", "r": "4.6.1", "check": "WARNING", "artifact": "11307005477" } ], "_host": "GitHub-Actions", "_buildurl": "https://github.com/r-universe/epiverse-connect/actions/runs/37209802169", "_status": "failure", "_upstream": "https://github.com/mponce0/covid19.analytics", "_commit": { "id": "ef3236c77073d103c1177053eee028560362bd31", "author": "Marcelo Ponce ", "committer": "Marcelo Ponce ", "message": "typo\n", "time": 1660808962 }, "_maintainer": { "name": "Marcelo Ponce", "email": "m.ponce@utoronto.ca", "login": "mponce0", "description": "", "uuid": 11408659 }, "_distro": "resolute", "_registered": true, "_dependencies": [ { "package": "readxl", "role": "Imports" }, { "package": "ape", "role": "Imports" }, { "package": "rentrez", "role": "Imports" }, { "package": "plotly", "role": "Imports" }, { "package": "htmlwidgets", "role": "Imports" }, { "package": "deSolve", "role": "Imports" }, { "package": "gplots", "role": "Imports" }, { "package": "pheatmap", "role": "Imports" }, { "package": "shiny", "role": "Imports" }, { "package": "shinydashboard", "role": "Imports" }, { "package": "shinycssloaders", "role": "Imports" }, { "package": "DT", "role": "Imports" }, { "package": "dplyr", "role": "Imports" }, { "package": "collapsibleTree", "role": "Imports" }, { "package": "knitr", "role": "Suggests" }, { "package": "devtools", "role": "Suggests" }, { "package": "roxygen2", "role": "Suggests" }, { "package": "markdown", "role": "Suggests" }, { "package": "rmarkdown", "role": "Suggests" }, { "package": "testthat", "role": "Suggests" } ], "_owner": "mponce0", "_selfowned": false, "_usedby": 0, "_updates": [], "_tags": [], "_topics": [ "covid19", "covid19-data", "ncov2019", "sars-cov-2" ], "_stars": 35, "_contributors": [ { "user": "mponce0", "count": 12836, "uuid": 11408659 }, { "user": "crispaslhs", "count": 3, "uuid": 12401204 } ], "_userbio": { "uuid": 114159794, "type": "organization", "name": "Epiverse-CONNECT", "followers": 6 }, "_downloads": { "count": 517, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/covid19.analytics" }, "_devurl": "https://github.com/mponce0/covid19.analytics", "_searchresults": 20, "_rbuild": "4.6.1", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/covid19.analytics.html", "extra/NEWS.html", "extra/NEWS.txt", "extra/readme.html", "extra/readme.md", "LICENSE" ], "_homeurl": "https://github.com/mponce0/covid19.analytics", "_realowner": "mponce0", "_cranurl": true, "_releases": [ { "version": "1.0", "date": "2020-04-06" }, { "version": "1.0.1", "date": "2020-04-13" }, { "version": "1.1", "date": "2020-05-03" }, { "version": "1.1.1", "date": "2020-07-13" }, { "version": "2.0", "date": "2020-09-28" }, { "version": "2.1", "date": "2021-03-23" }, { "version": "2.1.1", "date": "2021-09-14" }, { "version": "2.1.2", "date": "2022-04-06" }, { "version": "2.1.3", "date": "2022-08-18" }, { "version": "2.1.3.1", "date": "2023-05-25" }, { "version": "2.1.3.2", "date": "2023-10-10" }, { "version": "2.1.3.3", "date": "2023-10-15" } ], "_exports": [ "c19.fasta.data", "c19.genomic.data", "c19.NP_fasta.data", "c19.NPs.data", "c19.ptree.data", "c19.refGenome.data", "consistency.check", "covid19.Canada.data", "covid19.data", "covid19.genomic.data", "covid19.JHU.data", "covid19.testing.data", "covid19.Toronto_city.data", "covid19.Toronto_OD.data", "covid19.Toronto.data", "covid19.URL_csv.data", "covid19.US.data", "covid19.vaccination", "covid19dashboard", "covid19Explorer", "data.checks", "estimateRRs", "generate.SIR.model", "geographicalRegions", "growth.rate", "integrity.check", "itrends", "live.map", "mrollingRates", "mtrends", "nullify.data", "pandemics.data", "plt.SIR.model", "preProcessingData", "report.summary", "rollingRate", "single.trend", "sweep.SIR.models", "totals.plt", "tots.per.location", "X.covid19.genomic.data" ], "_help": [], "_readme": "https://github.com/mponce0/covid19.analytics/raw/HEAD/README.md", "_rundeps": [ "ape", "askpass", "base64enc", "bitops", "bslib", "cachem", "caTools", "cellranger", "cli", "collapsibleTree", "commonmark", "cpp11", "crayon", "crosstalk", "curl", "data.table", "data.tree", "deSolve", "digest", "dplyr", "DT", "evaluate", "farver", "fastmap", "fontawesome", "fs", "generics", "ggplot2", "glue", "gplots", "gtable", "gtools", "highr", "hms", "htmltools", "htmlwidgets", "httpuv", "httr", "isoband", "jquerylib", "jsonlite", "KernSmooth", "knitr", "labeling", "later", "lattice", "lazyeval", "lifecycle", "magrittr", "memoise", "mime", "nlme", "openssl", "otel", "pheatmap", "pillar", "pkgconfig", "plotly", "prettyunits", "progress", "promises", "purrr", "R6", "rappdirs", "RColorBrewer", "Rcpp", "readxl", "rematch", "rentrez", "rlang", "rmarkdown", "S7", "sass", "scales", "shiny", "shinycssloaders", "shinydashboard", "sourcetools", "stringi", "stringr", "sys", "tibble", "tidyr", "tidyselect", "tinytex", "utf8", "vctrs", "viridisLite", "withr", "xfun", "XML", "xtable", "yaml" ], "_vignettes": [ { "source": "covid19.analytics.Rmd", "filename": "covid19.analytics.html", "title": "covid19.analytics Package: get access to and analyze the live worldwide data from the novel CoViD19 from JHU repository", "author": "Marcelo Ponce", "engine": "knitr::rmarkdown", "headings": [], "created": "2020-04-01 20:36:45", "modified": "2020-04-01 20:36:45", "commits": 1 } ], "_score": 5.544068044350276, "_indexed": false, "_nocasepkg": "covid19.analytics", "_universes": [ "epiverse-connect" ], "_indexurl": "https://mponce0.r-universe.dev/covid19.analytics", "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "2.1.3", "date": "2026-10-04T14:44:10.000Z", "distro": "resolute", "commit": "ef3236c77073d103c1177053eee028560362bd31", "fileid": "https://r2.ropensci.org/a195e4d7dd9444bf3a2d6b66a38583c5ccff16382f7e9abb9157f870065dc3bd", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/epiverse-connect/actions/runs/37209802169" }, { "r": "4.6.1", "os": "linux", "version": "2.1.3", "date": "2026-10-04T14:43:56.000Z", "distro": "resolute", "commit": "ef3236c77073d103c1177053eee028560362bd31", "fileid": "https://r2.ropensci.org/8bd2a61aa527d4bc151f382dc368fe3ddd9d323f9225a598fdf22e153a22ca65", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/epiverse-connect/actions/runs/37209802169" }, { "r": "4.5.3", "os": "mac", "version": "2.1.3", "date": "2026-10-04T14:47:53.000Z", "commit": "ef3236c77073d103c1177053eee028560362bd31", "fileid": "https://r2.ropensci.org/9bdbd396ec6e3c32f6aa9c2b5c86aa3ac70955ca4f5c4653382686b6256dffe4", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/epiverse-connect/actions/runs/37209802169" }, { "r": "4.6.1", "os": "mac", "version": "2.1.3", "date": "2026-10-04T14:43:58.000Z", "commit": "ef3236c77073d103c1177053eee028560362bd31", "fileid": "https://r2.ropensci.org/ede87abc9f1c7d197db3fa48c739a431808b8ff77e2543f2e8b641e458baff85", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/epiverse-connect/actions/runs/37209802169" }, { "r": "4.6.0", "os": "wasm", "version": "2.1.3", "date": "2026-10-04T14:44:23.000Z", "commit": "ef3236c77073d103c1177053eee028560362bd31", "fileid": "https://r2.ropensci.org/d1a7e8be1d86bed320cae5b03a648e608a394181214ae1e920325830964fa854", "status": "success", "buildurl": "https://github.com/r-universe/epiverse-connect/actions/runs/37209802169" }, { "r": "4.7.0", "os": "win", "version": "2.1.3", "date": "2026-10-04T14:43:34.000Z", "commit": "ef3236c77073d103c1177053eee028560362bd31", "fileid": "https://r2.ropensci.org/b87983046b942dc62f354a738d9ab1b026b646604c15a387f2fc2308f81ebf2f", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/epiverse-connect/actions/runs/37209802169" }, { "r": "4.5.3", "os": "win", "version": "2.1.3", "date": "2026-10-04T14:43:00.000Z", "commit": "ef3236c77073d103c1177053eee028560362bd31", "fileid": "https://r2.ropensci.org/15782e10c4e3e5634794561a7e0ea823be223a3162e91aeba3fcbf41e92e0a2f", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/epiverse-connect/actions/runs/37209802169" }, { "r": "4.6.1", "os": "win", "version": "2.1.3", "date": "2026-10-04T14:43:17.000Z", "commit": "ef3236c77073d103c1177053eee028560362bd31", "fileid": "https://r2.ropensci.org/1d1da85dc4cb9083a753717397d326e4488989d3a7b38d5caa4f0ab99d59729f", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/epiverse-connect/actions/runs/37209802169" } ] }