{
  "_id": "6aae478b3d719c1f8407a9ab",
  "Package": "denguedatahub",
  "Title": "A Tidy Format Datasets of Dengue by Country",
  "Version": "3.1.0",
  "Authors@R": "person(\"Thiyanga S.\", \"Talagala\", , \"ttalagala@sjp.ac.lk\", role = c(\"aut\", \"cre\"),\ncomment = c(ORCID = \"0000-0002-0656-9789\"))",
  "Description": "Provides a weekly, monthly, yearly summary of dengue cases\nby state/ province/ country.",
  "License": "GPL-3",
  "URL": "https://denguedatahub.netlify.app/",
  "BugReports": "https://github.com/thiyangt/denguedatahub/issues",
  "Encoding": "UTF-8",
  "Roxygen": "list(markdown = TRUE)",
  "RoxygenNote": "7.3.2",
  "LazyData": "true",
  "SystemRequirements": "Java (>= 7.0): openjdk-11-jdk (deb),\njava-11-openjdk.x86_64 (rpm), openjdk@11 (brew)",
  "Config/pak/sysreqs": "make default-jdk libicu-dev libpng-dev libxml2-dev\nlibssl-dev libx11-dev",
  "Repository": "https://epiverse-connect.r-universe.dev",
  "Date/Publication": "2025-06-23 11:39:25 UTC",
  "RemoteUrl": "https://github.com/thiyangt/denguedatahub",
  "RemoteRef": "HEAD",
  "RemoteSha": "05c91fa93d67d1efe48bb3dd68cace7a0d74c666",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-09-19 08:23:34 UTC",
    "User": "root"
  },
  "Author": "Thiyanga S. Talagala [aut, cre] (ORCID:\n<https://orcid.org/0000-0002-0656-9789>)",
  "Maintainer": "Thiyanga S. Talagala <ttalagala@sjp.ac.lk>",
  "_user": "epiverse-connect",
  "_type": "src",
  "_file": "denguedatahub_3.1.0.tar.gz",
  "_fileid": "https://r2.ropensci.org/65e38c3a1659d8c00ebe8d6e2fcf7edc13e000eef77144c63edcdb7a2cfbefd4",
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  "_sha256": "65e38c3a1659d8c00ebe8d6e2fcf7edc13e000eef77144c63edcdb7a2cfbefd4",
  "_expires": "2026-12-28T08:27:53.000Z",
  "_created": "2026-09-19T08:23:34.000Z",
  "_published": "2026-09-19T08:27:55.776Z",
  "_jobs": [
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  "_host": "GitHub-Actions",
  "_buildurl": "https://github.com/r-universe/epiverse-connect/actions/runs/35431709394",
  "_status": "success",
  "_upstream": "https://github.com/thiyangt/denguedatahub",
  "_commit": {
    "id": "05c91fa93d67d1efe48bb3dd68cace7a0d74c666",
    "author": "thiyangt <tstalagala@gmail.com>",
    "committer": "thiyangt <tstalagala@gmail.com>",
    "message": "updated\n",
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  },
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    "email": "ttalagala@sjp.ac.lk",
    "login": "thiyangtdata",
    "description": "",
    "uuid": 59036052,
    "orcid": "0000-0002-0656-9789"
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      "package": "dplyr",
      "role": "Imports"
    },
    {
      "package": "tibble",
      "role": "Imports"
    },
    {
      "package": "tidyr",
      "role": "Imports"
    },
    {
      "package": "rvest",
      "role": "Imports"
    },
    {
      "package": "stringr",
      "role": "Imports"
    },
    {
      "package": "lifecycle",
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    },
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      "package": "magrittr",
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    {
      "package": "here",
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    {
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    },
    {
      "package": "purrr",
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    },
    {
      "package": "xml2",
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    {
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      "role": "Suggests"
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    {
      "package": "tsibble",
      "role": "Suggests"
    }
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  "_owner": "thiyangt",
  "_selfowned": false,
  "_usedby": 0,
  "_updates": [],
  "_tags": [],
  "_stars": 14,
  "_contributors": [
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      "uuid": 26638361
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  "_userbio": {
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    "type": "organization",
    "name": "Epiverse-CONNECT",
    "followers": 6
  },
  "_downloads": {
    "count": 471,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/denguedatahub"
  },
  "_devurl": "https://github.com/thiyangt/denguedatahub",
  "_searchresults": 50,
  "_topics": [
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  ],
  "_rbuild": "4.6.1",
  "_assets": [
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    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/denguedatahub.html",
    "extra/manual.pdf",
    "extra/readme.html",
    "extra/readme.md"
  ],
  "_homeurl": "https://github.com/thiyangt/denguedatahub",
  "_realowner": "thiyangt",
  "_cranurl": true,
  "_releases": [
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      "date": "2023-05-15"
    },
    {
      "version": "2.1.1",
      "date": "2024-09-22"
    },
    {
      "version": "3.1.0",
      "date": "2025-06-23"
    },
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      "version": "3.2.0",
      "date": "2025-06-25"
    },
    {
      "version": "4.1.0",
      "date": "2026-05-02"
    }
  ],
  "_exports": [
    "convert_slwer_to_tidy",
    "convert_srilanka_wer_to_tidy",
    "download_pdfwer_srilanka",
    "filter_year_wer",
    "get_addresses",
    "get_pdflinks_srilanka",
    "min_max"
  ],
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      "name": "americas_annual_data",
      "title": "Dengue and severe dengue cases and deaths for subregions of the Americas",
      "object": "americas_annual_data",
      "class": [
        "tbl_df",
        "tbl",
        "data.frame"
      ],
      "fields": [
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        "country",
        "type",
        "cases",
        "year"
      ],
      "rows": 899134,
      "table": true,
      "tojson": true
    },
    {
      "name": "cdc_casesby_week",
      "title": "All dengue cases by week in US states and territories, 2010 - 2023",
      "object": "cdc_casesby_week",
      "class": [
        "spec_tbl_df",
        "tbl_df",
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        "data.frame"
      ],
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        "Travel.status",
        "Week",
        "Reported.cases"
      ],
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      "table": true,
      "tojson": true
    },
    {
      "name": "cdc_dengue_agesex",
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      "object": "cdc_dengue_agesex",
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      ],
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        "Travel.status",
        "Age",
        "Male",
        "Female"
      ],
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      "table": true,
      "tojson": true
    },
    {
      "name": "cdc_dengue_casesbyjurisdiction",
      "title": "All dengue cases by jurisdiction of residence in US states and territories, 2010 - 2023",
      "object": "cdc_dengue_casesbyjurisdiction",
      "class": [
        "spec_tbl_df",
        "tbl_df",
        "tbl",
        "data.frame"
      ],
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        "Travel.status",
        "Jurisdiction",
        "Count",
        "Legend",
        "Notes"
      ],
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      "table": true,
      "tojson": true
    },
    {
      "name": "cdc_dengue_countyyear",
      "title": "All dengue cases by county of residence in US states and territories, 2010 - 2023",
      "object": "cdc_dengue_countyyear",
      "class": [
        "spec_tbl_df",
        "tbl_df",
        "tbl",
        "data.frame"
      ],
      "fields": [
        "FullGeoName",
        "Year",
        "Travel.status",
        "County",
        "Legend",
        "Notes",
        null
      ],
      "rows": 3900,
      "table": true,
      "tojson": true
    },
    {
      "name": "cdc_local_dengue_cases",
      "title": "Locally acquired dengue cases by year, 2010 - 2023",
      "object": "cdc_local_dengue_cases",
      "class": [
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        "tbl_df",
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        "data.frame"
      ],
      "fields": [
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        "Travel.status",
        "Reported.cases"
      ],
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      "table": true,
      "tojson": true
    },
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      "object": "cdc_travel_associated_dengue_cases",
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        "Travel.status",
        "Reported.cases"
      ],
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      "table": true,
      "tojson": true
    },
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      "name": "cdc_usa_dengue_infection",
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      "object": "cdc_usa_dengue_infection",
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        "tbl",
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      ],
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      "table": true,
      "tojson": true
    },
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      ],
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        "year",
        "additional_information",
        "value"
      ],
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      "table": true,
      "tojson": true
    },
    {
      "name": "korea_dengue",
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      "class": [
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        "tbl",
        "data.frame"
      ],
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        "Region",
        "2011",
        "2012",
        "2013",
        "2014",
        "2015"
      ],
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      "table": true,
      "tojson": true
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      "name": "level_of_risk",
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      "table": true,
      "tojson": true
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        "tbl",
        "data.frame"
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      "table": true,
      "tojson": true
    },
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      "name": "singapore_weekly_data",
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      "class": [
        "tbl_df",
        "tbl",
        "data.frame"
      ],
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        "year",
        "week",
        "cases"
      ],
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      "table": true,
      "tojson": true
    },
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      "title": "Annual reported dengue cases in Sri Lanka",
      "object": "sl_annual",
      "class": [
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        "tbl_df",
        "tbl",
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      ],
      "fields": [
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        "dengue.cases",
        "epidemic"
      ],
      "rows": 35,
      "table": true,
      "tojson": true
    },
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      "name": "sl_dengue_serotype",
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        "tbl_df",
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        "data.frame"
      ],
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        "reporting.year",
        "dengue.serotype"
      ],
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      "table": true,
      "tojson": true
    },
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        "tbl",
        "data.frame"
      ],
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        "province",
        "district"
      ],
      "rows": 26,
      "table": true,
      "tojson": true
    },
    {
      "name": "sl_sites",
      "title": "Type and proportion of breeding habitats positive for Aedes aegypti mosquitoes, across provinces in Sri Lanka, 2017.",
      "object": "sl_sites",
      "class": [
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        "tbl_df",
        "tbl",
        "data.frame"
      ],
      "fields": [
        "Province",
        "Discarded_items",
        "Water_storage_containers_and_tanks",
        "Ponds_and_ornamental_items",
        "Wells_and_tube_wells",
        "Natural_water_collections",
        "Other_miscellaneous_items"
      ],
      "rows": 9,
      "table": true,
      "tojson": true
    },
    {
      "name": "srilanka_weekly_data",
      "title": "Weekly number of dengue fever infections in Sri Lanka",
      "object": "srilanka_weekly_data",
      "class": [
        "numeric"
      ],
      "fields": [],
      "table": false,
      "tojson": true
    },
    {
      "name": "taiwan_dengue",
      "title": "Indigenous and imported dengue cases in Taiwan, 1987-2023.",
      "object": "taiwan_dengue",
      "class": [
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        "tbl",
        "data.frame"
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      "fields": [
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        "indigenous.dengue",
        "imported.dengue"
      ],
      "rows": 37,
      "table": true,
      "tojson": true
    },
    {
      "name": "world_annual",
      "title": "Annual number of dengue fever infections around the world",
      "object": "world_annual",
      "class": [
        "data.frame"
      ],
      "fields": [
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        "lat",
        "group",
        "order",
        "region",
        "subregion",
        "code",
        "year",
        "incidence",
        "dengue.present"
      ],
      "rows": 2773284,
      "table": true,
      "tojson": true
    }
  ],
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    {
      "page": "americas_annual_data",
      "title": "Dengue and severe dengue cases and deaths for subregions of the Americas",
      "topics": [
        "americas_annual_data"
      ]
    },
    {
      "page": "cdc_casesby_week",
      "title": "All dengue cases by week in US states and territories, 2010 - 2023",
      "topics": [
        "cdc_casesby_week"
      ]
    },
    {
      "page": "cdc_dengue_agesex",
      "title": "All dengue cases by age group and sex in US states and territories, 2010 - 2023",
      "topics": [
        "cdc_dengue_agesex"
      ]
    },
    {
      "page": "cdc_dengue_casesbyjurisdiction",
      "title": "All dengue cases by jurisdiction of residence in US states and territories, 2010 - 2023",
      "topics": [
        "cdc_dengue_casesbyjurisdiction"
      ]
    },
    {
      "page": "cdc_dengue_countyyear",
      "title": "All dengue cases by county of residence in US states and territories, 2010 - 2023",
      "topics": [
        "cdc_dengue_countyyear"
      ]
    },
    {
      "page": "cdc_local_dengue_cases",
      "title": "Locally acquired dengue cases by year, 2010 - 2023",
      "topics": [
        "cdc_local_dengue_cases"
      ]
    },
    {
      "page": "cdc_travel_associated_dengue_cases",
      "title": "Travel associated dengue cases by year, 2010 - 2023",
      "topics": [
        "cdc_travel_associated_dengue_cases"
      ]
    },
    {
      "page": "cdc_usa_dengue_infection",
      "title": "Annual number of dengue fever infections in the USA",
      "topics": [
        "cdc_usa_dengue_infection"
      ]
    },
    {
      "page": "china_annual_data",
      "title": "Dengue related data in China",
      "topics": [
        "china_annual_data"
      ]
    },
    {
      "page": "convert_slwer_to_tidy",
      "title": "Read weekly epidemiological reports and convert dengue data into tidy format",
      "topics": [
        "convert_slwer_to_tidy"
      ]
    },
    {
      "page": "convert_srilanka_wer_to_tidy",
      "title": "Read weekly epidemiological reports and convert dengue data into tidy format",
      "topics": [
        "convert_srilanka_wer_to_tidy"
      ]
    },
    {
      "page": "download_pdfwer_srilanka",
      "title": "Download and save weekly epidemiological reports from Epidemiology Unit, Ministry of Health, Sri Lanka (url https://www.epid.gov.lk/weekly-epidemiological-report/weekly-epidemiological-report)",
      "topics": [
        "download_pdfwer_srilanka"
      ]
    },
    {
      "page": "filter_year_wer",
      "title": "Filter links corresponds to a specific year using the function output get_address",
      "topics": [
        "filter_year_wer"
      ]
    },
    {
      "page": "get_addresses",
      "title": "Extract links of all downloadable files on a webpage",
      "topics": [
        "get_addresses"
      ]
    },
    {
      "page": "get_pdflinks_srilanka",
      "title": "Get URLs of weekly epidemiological reports from Epidemiology Unit, Ministry of Health, Sri Lanka (url https://www.epid.gov.lk/weekly-epidemiological-report/weekly-epidemiological-report)",
      "topics": [
        "get_pdflinks_srilanka"
      ]
    },
    {
      "page": "india_annual_data",
      "title": "DENGUE/DHF situation in India since 2017",
      "topics": [
        "india_annual_data"
      ]
    },
    {
      "page": "korea_dengue",
      "title": "Imported dengue cases in Korea",
      "topics": [
        "korea_dengue"
      ]
    },
    {
      "page": "level_of_risk",
      "title": "Level of Dengue risk around the world",
      "topics": [
        "level_of_risk"
      ]
    },
    {
      "page": "min_max",
      "title": "Apply min-max transformation",
      "topics": [
        "min_max"
      ]
    },
    {
      "page": "philippines_daily_data",
      "title": "Daily number of dengue fever infections in Philippines",
      "topics": [
        "philippines_daily_data"
      ]
    },
    {
      "page": "singapore_weekly_data",
      "title": "Weekly number of dengue fever infections in Sri Lanka",
      "topics": [
        "singapore_weekly_data"
      ]
    },
    {
      "page": "sl_annual",
      "title": "Annual reported dengue cases in Sri Lanka",
      "topics": [
        "sl_annual"
      ]
    },
    {
      "page": "sl_dengue_serotype",
      "title": "Identification of dengue serotypes circulating in Sri Lanka",
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