{ "_id": "6aaa5402ea78b3e62eacaf87", "Package": "superspreading", "Title": "Understand Individual-Level Variation in Infectious Disease\nTransmission", "Version": "0.3.0.9000", "Authors@R": "c(\nperson(\"Joshua W.\", \"Lambert\", , \"joshua.lambert@lshtm.ac.uk\", role = c(\"aut\", \"cre\", \"cph\"),\ncomment = c(ORCID = \"0000-0001-5218-3046\")),\nperson(\"Adam\", \"Kucharski\", , \"adam.kucharski@lshtm.ac.uk\", role = c(\"aut\", \"cph\"),\ncomment = c(ORCID = \"0000-0001-8814-9421\")),\nperson(\"Dillon C.\", \"Adam\", , \"dcadam@hku.hk\", role = \"aut\",\ncomment = c(ORCID = \"0000-0002-7485-9905\")),\nperson(\"Sebastian\", \"Funk\", , \"sebastian.funk@lshtm.ac.uk\", role = c(\"ctb\", \"cph\"),\ncomment = c(ORCID = \"0000-0002-2842-3406\", \".chain_sim uses code from bpmodels::chain_sim\")),\nperson(\"Pratik\", \"Gupte\", , \"pratik.gupte@lshtm.ac.uk\", role = \"rev\",\ncomment = c(ORCID = \"0000-0001-5294-7819\")),\nperson(\"Hugo\", \"Gruson\", , \"hugo@data.org\", role = \"rev\",\ncomment = c(ORCID = \"0000-0002-4094-1476\")),\nperson(\"James M.\", \"Azam\", , \"james.azam@lshtm.ac.uk\", role = c(\"rev\", \"ctb\"),\ncomment = c(ORCID = \"0000-0001-5782-7330\")),\nperson(\"Chris\", \"Hartgerink\", , \"chris@data.org\", role = \"rev\",\ncomment = c(ORCID = \"0000-0003-1050-6809\"))\n)", "Description": "Estimate and understand individual-level variation in\ntransmission. Implements density and cumulative compound\nPoisson discrete distribution functions ('Kremer et al.' (2021)\n), as well as functions to\ncalculate infectious disease outbreak statistics given\nepidemiological parameters on individual-level transmission;\nincluding the probability of an outbreak becoming an\nepidemic/extinct ('Kucharski et al.' (2020)\n), or the cluster size\nstatistics, e.g. what proportion of cases cause X\\% of\ntransmission ('Lloyd-Smith et al.' (2005)\n).", "License": "MIT + file LICENSE", "URL": "https://github.com/epiverse-trace/superspreading,\nhttps://epiverse-trace.github.io/superspreading/", "BugReports": "https://github.com/epiverse-trace/superspreading/issues", "VignetteBuilder": "knitr", "Config/Needs/website": "epiverse-trace/epiversetheme", "Config/testthat/edition": "3", "Encoding": "UTF-8", "Language": "en-GB", "Roxygen": "list(markdown = TRUE)", "RoxygenNote": "7.3.2", "Repository": "https://epiverse-connect.r-universe.dev", "Date/Publication": "2025-01-28 17:46:47 UTC", "RemoteUrl": "https://github.com/epiverse-trace/superspreading", "RemoteRef": "HEAD", "RemoteSha": "7f2b20ec201b6d7fc3eb63f882d197ea6d8d8d4e", "NeedsCompilation": "no", "Packaged": { "Date": "2026-09-16 08:24:53 UTC", "User": "root" }, "Author": "Joshua W. Lambert [aut, cre, cph] (ORCID:\n),\nAdam Kucharski [aut, cph] (ORCID:\n),\nDillon C. Adam [aut] (ORCID: ),\nSebastian Funk [ctb, cph] (ORCID:\n, .chain_sim uses code from\nbpmodels::chain_sim),\nPratik Gupte [rev] (ORCID: ),\nHugo Gruson [rev] (ORCID: ),\nJames M. Azam [rev, ctb] (ORCID:\n),\nChris Hartgerink [rev] (ORCID: )", "Maintainer": "Joshua W. 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