Encoding: UTF-8
Package: inctools
Type: Package
Title: Incidence Estimation Tools
Version: 1.0.9006
Date: 2020-06-16
Authors@R: c(
  person("Eduard","Grebe",email="Eduard.Grebe@ucsf.edu",role=c("cre","aut")),
  person("Alex","Welte", email="alexwelte@sun.ac.za", role="aut"),
  person("Avery","McIntosh",email="avery.i.mcintosh@gmail.com",role="aut"),
  person("Petra","Bäumler",email="petra.baeumler@med.uni-muenich.de",role="aut"),
  person("Reshma","Kassanjee", role="ctb"),
  person("Hilmarie","Brand", role="ctb"),
  person("Cari","Van Schalkwyk", role="ctb"),
  person("Yuruo","Li",email="yul123@pitt.edu", role="ctb"),
  person("Simon","Daniel",email="skjdaniel@gmail.com", role="ctb"),
  person("Stefano","Ongarello", email="stefano.ongarello@finddx.org", role="aut"),
  person("Yusuke","Asai", email="yusuke.asai@yahoo.de", role="ctb"),
  person("Jeffrey","Eaton", email="jeffrey.eaton@imperial.ac.uk", role="ctb")
  )
Description: Tools for estimating incidence from biomarker data in
        cross- sectional surveys, and for calibrating tests for recent
        infection. Implements and extends the method of Kassanjee et
        al. (2012) <doi:10.1097/EDE.0b013e3182576c07>.
URL: https://github.sacema.org/inctools/index.html
BugReports: https://github.com/SACEMA/inctools/issues
Depends: R (>= 3.6.0)
License: GPL-3
LazyData: True
Imports: stats, utils, magrittr, rlang (>= 0.4.0), dplyr (>= 0.8.0),
        tidyr (>= 1.0.0), tibble (>= 2.1.0), cubature, tmvtnorm,
        ggplot2, glm2 (>= 1.2.0), plyr, pracma, foreach, parallel,
        doParallel, binom
Suggests: survey, knitr, rmarkdown, testthat (>= 2.1.0)
VignetteBuilder: knitr
RoxygenNote: 7.1.0
Roxygen: list(roclets = c("rd", "collate", "namespace", "vignette"))
Config/pak/sysreqs: make libicu-dev
Repository: https://epiverse-connect.r-universe.dev
Date/Publication: 2021-03-29 18:10:05 UTC
RemoteUrl: https://github.com/SACEMA/inctools
RemoteRef: HEAD
RemoteSha: 4877c42d6fb3171c0bdcafc10b5f020b42881436
NeedsCompilation: no
Packaged: 2026-09-20 06:54:50 UTC; root
Author: Eduard Grebe [cre, aut],
  Alex Welte [aut],
  Avery McIntosh [aut],
  Petra Bäumler [aut],
  Reshma Kassanjee [ctb],
  Hilmarie Brand [ctb],
  Cari Van Schalkwyk [ctb],
  Yuruo Li [ctb],
  Simon Daniel [ctb],
  Stefano Ongarello [aut],
  Yusuke Asai [ctb],
  Jeffrey Eaton [ctb]
Maintainer: Eduard Grebe <Eduard.Grebe@ucsf.edu>