Package: cleanepi 1.0.2.9000

Karim Mané

cleanepi: Clean and Standardize Epidemiological Data

Cleaning and standardizing tabular data package, tailored specifically for curating epidemiological data. It streamlines various data cleaning tasks that are typically expected when working with datasets in epidemiology. It returns the processed data in the same format, ensuring seamless integration into existing workflows. Additionally, it generates a comprehensive report detailing the outcomes of each cleaning task.

Authors:Karim Mané [aut, cre], Thibaut Jombart [ctb], Abdoelnaser Degoot [aut], Bankolé Ahadzie [aut], Nuredin Mohammed [aut], Bubacarr Bah [aut], Hugo Gruson [ctb, rev], Pratik R. Gupte [rev], James M. Azam [rev], Joshua W. Lambert [rev], Chris Hartgerink [rev], Andree Valle-Campos [rev, ctb], London School of Hygiene and Tropical Medicine, LSHTM [cph], data.org [fnd]

cleanepi_1.0.2.9000.tar.gz
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cleanepi_1.0.2.9000.tgz(r-4.4-any)cleanepi_1.0.2.9000.tgz(r-4.3-any)
cleanepi_1.0.2.9000.tar.gz(r-4.5-noble)cleanepi_1.0.2.9000.tar.gz(r-4.4-noble)
cleanepi_1.0.2.9000.tgz(r-4.4-emscripten)cleanepi_1.0.2.9000.tgz(r-4.3-emscripten)
cleanepi.pdf |cleanepi.html✨
cleanepi/json (API)
NEWS

# Install 'cleanepi' in R:
install.packages('cleanepi', repos = c('https://epiverse-connect.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/epiverse-trace/cleanepi/issues

Datasets:

On CRAN:

data-cleaningepidemiologyepiverse

7.29 score 8 stars 16 scripts 213 downloads 19 exports 41 dependencies

Last updated 12 hours agofrom:bed289331c. Checks:OK: 7. Indexed: no.

TargetResultDate
Doc / VignettesOKOct 22 2024
R-4.5-winOKOct 22 2024
R-4.5-linuxOKOct 22 2024
R-4.4-winOKOct 22 2024
R-4.4-macOKOct 22 2024
R-4.3-winOKOct 22 2024
R-4.3-macOKOct 22 2024

Exports:%>%add_to_dictionaryadd_to_reportcheck_date_sequencecheck_subject_idsclean_dataclean_using_dictionaryconvert_numeric_to_dateconvert_to_numericcorrect_subject_idsfind_duplicatesprint_reportremove_constantsremove_duplicatesreplace_missing_valuesscan_datastandardize_column_namesstandardize_datestimespan

Dependencies:backportsbitbit64checkmateclicliprcpp11crayondplyrfansiforcatsgenericsgluehmsjanitorlifecyclelinelistlubridatemagrittrmatchmakernumberizepillarpkgconfigprettyunitsprogresspurrrR6readrrlangsnakecasestringistringrtibbletidyrtidyselecttimechangetzdbutf8vctrsvroomwithr

Introduction to cleanepi

Rendered fromcleanepi.Rmdusingknitr::rmarkdownon Oct 22 2024.

Last update: 2024-10-21
Started: 2023-03-07

Package Design vignette for {cleanepi}

Rendered fromdesign_principle.Rmdusingknitr::rmarkdownon Oct 22 2024.

Last update: 2024-10-22
Started: 2024-01-20