This package is considered a duplicate. The official version of this package is found at:https://ropensci.r-universe.dev/dbparser

Package: dbparser 2.0.3

Mohammed Ali

dbparser: Drugs Databases Parser

This tool is for parsing public drug databases such as 'DrugBank' XML database <https://go.drugbank.com/>. The parsed data are then returned in a proper 'R' object called 'dvobject'.

Authors:Mohammed Ali [aut, cre], Ali Ezzat [aut], Hao Zhu [rev], Emma Mendelsohn [rev]

dbparser_2.0.3.tar.gz
dbparser_2.0.3.zip(r-4.7-any)dbparser_2.0.3.zip(r-4.6-any)dbparser_2.0.3.zip(r-4.5-any)
dbparser_2.0.3.tgz(r-4.6-any)dbparser_2.0.3.tgz(r-4.5-any)
dbparser_2.0.3.tar.gz(r-4.7-any)dbparser_2.0.3.tar.gz(r-4.6-any)
dbparser_2.0.3.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
dbparser/json (API)

# Install 'dbparser' in R:

install.packages('dbparser', repos = c('https://epiverse-connect.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/ropensci/dbparser/issues

Pkgdown/docs site:https://docs.ropensci.org

On CRAN:

8.45 score 67 stars 265 scripts 624 downloads 4 mentions 5 exports 21 dependencies

Last updated from:39d9a07850. Checks:9 OK. Indexed: no.

Target	Result	Time
linux-devel	OK	161
source / vignettes	OK	183
linux-release	OK	139
macos-release	OK	106
macos-oldrel	OK	103
windows-devel	OK	89
windows-release	OK	84
windows-oldrel	OK	86
wasm-release	OK	110

Exports:cett_nodes_options drug_node_options parseDrugBank references_node_options show_dvobject_metadata

Dependencies:cli crayon dplyr generics glue hms lifecycle magrittr pillar pkgconfig prettyunits progress purrr R6 rlang tibble tidyselect utf8 vctrs withr XML

DrugBank Database XML Parser

Introduction | Loading and Parsing the Data | Exploring the data

Rendered fromdbparser.Rmdusingknitr::rmarkdown

Last update: 2024-02-16
Started: 2018-10-04

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
returns carriers, enzymes,targets and transporters node valid options.	cett_nodes_options
returns drug node valid options.	drug_node_options
parseDrugBank	parseDrugBank
returns references node valid options.	references_node_options
init_dvobject Returns data.frame with two columns (key, value) of dvobject attributes	show_dvobject_metadata