Package: epicontacts 1.1.4

Finlay Campbell

epicontacts: Handling, Visualisation and Analysis of Epidemiological Contacts

A collection of tools for representing epidemiological contact data, composed of case line lists and contacts between cases. Also contains procedures for data handling, interactive graphics, and statistics.

Authors:Finlay Campbell [aut, cre], Thibaut Jombart [aut], Nistara Randhawa [aut], Bertrand Sudre [aut], VP Nagraj [aut], Thomas Crellen [aut], Zhian N. Kamvar [aut]

epicontacts_1.1.4.tar.gz
epicontacts_1.1.4.zip(r-4.5)epicontacts_1.1.4.zip(r-4.4)epicontacts_1.1.4.zip(r-4.3)
epicontacts_1.1.4.tgz(r-4.5-any)epicontacts_1.1.4.tgz(r-4.4-any)epicontacts_1.1.4.tgz(r-4.3-any)
epicontacts_1.1.4.tar.gz(r-4.5-noble)epicontacts_1.1.4.tar.gz(r-4.4-noble)
epicontacts_1.1.4.tgz(r-4.4-emscripten)epicontacts_1.1.4.tgz(r-4.3-emscripten)
epicontacts.pdf |epicontacts.html✨
epicontacts/json (API)
NEWS

# Install 'epicontacts' in R:
install.packages('epicontacts', repos = c('https://epiverse-connect.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/reconhub/epicontacts/issues

Pkgdown site:https://www.repidemicsconsortium.org

On CRAN:

outbreak

8.86 score 15 stars 2 packages 112 scripts 704 downloads 3 mentions 16 exports 46 dependencies

Last updated 1 months agofrom:b0a253cce7. Checks:8 OK. Indexed: no.

TargetResultLatest binary
Doc / VignettesOKFeb 19 2025
R-4.5-winOKFeb 19 2025
R-4.5-macOKFeb 19 2025
R-4.5-linuxOKFeb 19 2025
R-4.4-winOKFeb 19 2025
R-4.4-macOKFeb 19 2025
R-4.3-winOKFeb 19 2025
R-4.3-macOKFeb 19 2025

Exports:cases_palcodeawesomeedges_palfac2colget_clustersget_degreeget_idget_pairwisegraph3Dmake_epicontactsspectralsubset_clusters_by_idsubset_clusters_by_sizethintranspvis_epicontacts

Dependencies:base64encbslibcachemclicpp11crosstalkdigestdplyrevaluatefansifastmapfontawesomefsgenericsgluehighrhtmltoolshtmlwidgetsigraphjquerylibjsonliteknitrlatticelazyevallifecyclemagrittrMatrixmemoisemimepillarpkgconfigR6rappdirsrlangrmarkdownsassthreejstibbletidyselecttinytexutf8vctrsvisNetworkwithrxfunyaml

epicontacts Class: Details Regarding the Data Structure for epicontacts Objects

VP Nagraj

Rendered fromepicontacts_class.Rmdusingknitr::rmarkdownon Feb 19 2025.

Last update: 2018-04-11
Started: 2016-12-22

epicontacts: Manipulation, Visualisation and Analysis of Epidemiological Contact Data

Rendered fromepicontacts.Rmdusingknitr::rmarkdownon Feb 19 2025.

Last update: 2017-05-21
Started: 2016-06-28