Package: etm 1.1.2

Arthur Allignol

etm: Empirical Transition Matrix

The etm (empirical transition matrix) package permits to estimate the matrix of transition probabilities for any time-inhomogeneous multi-state model with finite state space using the Aalen-Johansen estimator. Functions for data preparation and for displaying are also included (Allignol et al., 2011 <doi:10.18637/jss.v038.i04>). Functionals of the Aalen-Johansen estimator, e.g., excess length-of-stay in an intermediate state, can also be computed (Allignol et al. 2011 <doi:10.1007/s00180-010-0200-x>).

Authors:Arthur Allignol [aut], Mark Clements [cre, aut]

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etm_1.1.2.tar.gz(r-4.5-noble)etm_1.1.2.tar.gz(r-4.4-noble)
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etm.pdf |etm.html
etm/json (API)

# Install 'etm' in R:
install.packages('etm', repos = c('https://epiverse-connect.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/mclements/etm/issues

Uses libs:
  • openblas– Optimized BLAS
  • c++– GNU Standard C++ Library v3
Datasets:
  • abortion - Pregnancies exposed to coumarin derivatives
  • fourD - Placebo data from the 4D study
  • los.data - Length of hospital stay
  • sir.cont - Ventilation status in intensive care unit patients

On CRAN:

7.88 score 11 packages 82 scripts 5.7k downloads 17 mentions 12 exports 6 dependencies

Last updated 3 years agofrom:f297fc466a. Checks:OK: 7 NOTE: 2. Indexed: no.

TargetResultDate
Doc / VignettesOKOct 10 2024
R-4.5-win-x86_64NOTEOct 10 2024
R-4.5-linux-x86_64NOTEOct 10 2024
R-4.4-win-x86_64OKOct 10 2024
R-4.4-mac-x86_64OKOct 10 2024
R-4.4-mac-aarch64OKOct 10 2024
R-4.3-win-x86_64OKOct 10 2024
R-4.3-mac-x86_64OKOct 10 2024
R-4.3-mac-aarch64OKOct 10 2024

Exports:closclosPseudoetmetmCIFetmprepprepare.los.datatra_comptra_illtra_ill_comptra_survtrcovtrprob

Dependencies:data.tablelatticeMatrixRcppRcppArmadillosurvival

Computing Cumulative Incidence Functions with the etmCIF Function

Rendered frometmCIF_tutorial.Rnwusingutils::Sweaveon Oct 10 2024.

Last update: 2020-09-02
Started: 2020-09-02